Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bcop_2091Protein of unknown function DUF799; COGs: COG4380 conserved hypothetical protein; InterPro IPR008517; KEGG: sbn:Sbal195_4118 hypothetical protein; PFAM: Protein of unknown function DUF799; SPTR: Putative lipoprotein; IMG reference gene:2504107811; PFAM: Putative bacterial lipoprotein (DUF799). (249 aa)    
Predicted Functional Partners:
Bcop_2092
KEGG: sbn:Sbal195_4119 TPR repeat-containing protein; SPTR: Lipoprotein; IMG reference gene:2504107812.
 
    0.980
Bcop_2094
Curli production assembly/transport component CsgG; COGs: COG1462 Uncharacterized protein involved in formation of curli polymers; InterPro IPR005534; KEGG: sbn:Sbal195_4121 curli production assembly/transport component CsgG; PFAM: Curli production assembly/transport component CsgG; SPTR: Curli production assembly/transport component CsgG; IMG reference gene:2504107814; PFAM: Curli production assembly/transport component CsgG.
 
    0.974
Bcop_2093
KEGG: bha:BH2131 hypothetical protein; SPTR: Putative lipoprotein; IMG reference gene:2504107813.
       0.821
Your Current Organism:
Bacteroides coprosuis
NCBI taxonomy Id: 679937
Other names: B. coprosuis DSM 18011, Bacteroides coprosuis DSM 18011, Bacteroides coprosuis PC139, Bacteroides coprosuis str. DSM 18011, Bacteroides coprosuis strain DSM 18011
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