Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bcop_2145KEGG: bth:BT_0097 conjugate transposon protein; SPTR: Conserved protein found in conjugate transposon; IMG reference gene:2504107866; PFAM: Protein of unknown function (DUF3408). (137 aa)    
Predicted Functional Partners:
Bcop_2144
Conjugate transposon protein; COGs: COG1192 ATPase involved in chromosome partitioning; KEGG: bth:BT_0098 conjugate transposon protein; SPTR: Conserved protein found in conjugate transposon; IMG reference gene:2504107865; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.
 
     0.948
Bcop_2146
KEGG: bth:BT_0096 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504107867.
       0.784
Bcop_1287
Conjugate transposon protein; COGs: COG1192 ATPase involved in chromosome partitioning; KEGG: bth:BT_0098 conjugate transposon protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504106993; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.
 
     0.781
Bcop_2112
KEGG: bfs:BF1239 hypothetical protein; SPTR: TraI; IMG reference gene:2504107833.
 
     0.777
Bcop_2118
Conjugative transposon protein TraO; InterPro IPR018899; KEGG: bfs:BF1233 hypothetical protein; PFAM: Conjugative transposon, TraO; SPTR: Putative uncharacterized protein; IMG reference gene:2504107839; PFAM: Conjugative transposon protein TraO.
  
    0.776
Bcop_2113
InterPro IPR022393:IPR012424; KEGG: bfr:BF1355 conjugate transposon protein; PFAM: Conjugative transposon, TraJ, C-terminal; SPTR: Putative uncharacterized protein; TIGRFAM: Conjugative transposon, TraJ; IMG reference gene:2504107834; PFAM: homologs of TraJ from Bacteroides conjugative transposon; TIGRFAM: Bacteroides conjugative transposon TraJ protein.
 
     0.775
Bcop_1286
KEGG: bfs:BF1248 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504106992.
  
     0.774
Bcop_2143
KEGG: bfs:BF1248 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504107864.
  
     0.774
Bcop_1285
InterPro IPR005094; KEGG: bth:BT_0101 hypothetical protein; PFAM: Endonuclease relaxase, MobA/VirD2; SPTR: Putative mobilisation protein; IMG reference gene:2504106991; PFAM: Relaxase/Mobilisation nuclease domain.
  
     0.772
Bcop_2142
InterPro IPR005094; KEGG: bth:BT_0101 hypothetical protein; PFAM: Endonuclease relaxase, MobA/VirD2; SPTR: Putative uncharacterized protein; IMG reference gene:2504107863; PFAM: Relaxase/Mobilisation nuclease domain.
  
     0.772
Your Current Organism:
Bacteroides coprosuis
NCBI taxonomy Id: 679937
Other names: B. coprosuis DSM 18011, Bacteroides coprosuis DSM 18011, Bacteroides coprosuis PC139, Bacteroides coprosuis str. DSM 18011, Bacteroides coprosuis strain DSM 18011
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