Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bcop_2152Hypothetical protein; InterPro IPR011579; KEGG: lic:LIC12051 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504107873. (1245 aa)    
Predicted Functional Partners:
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
    
  0.771
Bcop_1061
Protein of unknown function DUF1735; InterPro IPR006558:IPR013728; KEGG: pmz:HMPREF0659_A6287 putative lipoprotein; PFAM: Domain of unknown function DUF1735; SMART: LamG-like jellyroll fold; SPTR: Putative uncharacterized protein; IMG reference gene:2504106763; PFAM: Domain of unknown function (DUF1735); Pentaxin family.
  
    0.573
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
  
 0.558
Bcop_1060
InterPro IPR013728:IPR001223; KEGG: pmz:HMPREF0659_A6286 endo-beta-N-acetylglucosaminidase F1 domain protein; PFAM: Glycoside hydrolase, family 18, catalytic domain; Domain of unknown function DUF1735; PRIAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; SPTR: Putative uncharacterized protein; IMG reference gene:2504106762; PFAM: Domain of unknown function (DUF1735); Glycosyl hydrolases family 18.
  
     0.503
cobB
COGs: COG0846 NAD-dependent protein deacetylase SIR2 family; HAMAP: NAD-dependent histone deacetylase, silent information regulator Sir2; InterPro IPR003000; KEGG: bth:BT_2975 NAD-dependent deacetylase; PFAM: NAD-dependent histone deacetylase, silent information regulator Sir2; SPTR: NAD-dependent deacetylase (Regulatory protein SIR2-like protein); IMG reference gene:2504106125; PFAM: Sir2 family; Belongs to the sirtuin family. Class III subfamily.
    
 
 0.497
Bcop_0837
Allantoinase; COGs: COG0044 Dihydroorotase and related cyclic amidohydrolase; InterPro IPR006680; KEGG: bth:BT_0250 dihydroorotase; PFAM: Amidohydrolase 1; PRIAM: Allantoinase; SPTR: Dihydroorotase; IMG reference gene:2504106526; PFAM: Amidohydrolase family; TIGRFAM: dihydroorotase, multifunctional complex type.
    
   0.482
rnhB
Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
   
  
 0.433
Bcop_2150
Helix-turn-helix domain protein; InterPro IPR001387; KEGG: bvu:BVU_3426 hypothetical protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Putative uncharacterized protein; IMG reference gene:2504107871; PFAM: Helix-turn-helix.
       0.413
Bcop_2151
HNH endonuclease; InterPro IPR003615:IPR002711; KEGG: bvu:BVU_3427 hypothetical protein; PFAM: HNH endonuclease; SMART: HNH nuclease; SPTR: Putative uncharacterized protein; IMG reference gene:2504107872; PFAM: HNH endonuclease.
       0.413
Bcop_1112
AAA ATPase central domain protein; COGs: COG0464 ATPase of the AAA+ class; InterPro IPR003593:IPR003959; KEGG: pmz:HMPREF0659_A5347 ATPase, AAA family; PFAM: ATPase, AAA-type, core; SMART: ATPase, AAA+ type, core; SPTR: ATPase, AAA family; IMG reference gene:2504106814; PFAM: ATPase family associated with various cellular activities (AAA).
   
 
 0.402
Your Current Organism:
Bacteroides coprosuis
NCBI taxonomy Id: 679937
Other names: B. coprosuis DSM 18011, Bacteroides coprosuis DSM 18011, Bacteroides coprosuis PC139, Bacteroides coprosuis str. DSM 18011, Bacteroides coprosuis strain DSM 18011
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