STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bcop_2210Peptidase S46; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides. (721 aa)    
Predicted Functional Partners:
Bcop_2211
Peptidase S46; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides.
 
    
0.700
Bcop_0322
Dipeptidyl-peptidase IV; COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; InterPro IPR002469:IPR001375; KEGG: bfr:BF0085 dipeptidyl peptidase IV; PFAM: Peptidase S9B, dipeptidylpeptidase IV N-terminal; Peptidase S9, prolyl oligopeptidase, catalytic domain; PRIAM: Dipeptidyl-peptidase IV; SPTR: Putative uncharacterized protein; manually curated; IMG reference gene:2504105983; PFAM: Prolyl oligopeptidase family; Dipeptidyl peptidase IV (DPP IV) N-terminal region.
  
     0.678
Bcop_2208
Thioredoxin; COGs: COG3118 Thioredoxin domain-containing protein; InterPro IPR005746:IPR013766; KEGG: bfr:BF3176 thioredoxin; PFAM: Thioredoxin domain; SPTR: Thioredoxin; TIGRFAM: Thioredoxin; IMG reference gene:2504107929; PFAM: Thioredoxin; TIGRFAM: thioredoxin.
       0.631
Bcop_2209
COGs: COG3118 Thioredoxin domain-containing protein; InterPro IPR013766; KEGG: bfs:BF3015 putative thioredoxin; PFAM: Thioredoxin domain; SPTR: Thioredoxin; IMG reference gene:2504107930; PFAM: Thioredoxin; TIGRFAM: thioredoxin.
       0.620
Bcop_2082
Putative exported aminopeptidase; COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; InterPro IPR011659:IPR001375; KEGG: bfs:BF2627 putative exported aminopeptidase; SPTR: Putative exported aminopeptidase; IMG reference gene:2504107802; PFAM: Prolyl oligopeptidase family; WD40-like Beta Propeller Repeat.
  
     0.614
Bcop_2212
Radical SAM domain protein; COGs: COG0641 Arylsulfatase regulator (Fe-S oxidoreductase); InterPro IPR007197; KEGG: bth:BT_0238 anaerobic sulfatase-maturase; PFAM: Radical SAM; SPTR: Putative uncharacterized protein; IMG reference gene:2504107933; PFAM: Radical SAM superfamily; TIGRFAM: anaerobic sulfatase-maturating enzyme; radical SAM additional 4Fe4S-binding domain.
       0.556
Bcop_0042
Peptidase C1B bleomycin hydrolase; COGs: COG3579 Aminopeptidase C; InterPro IPR004134; KEGG: bth:BT_1789 aminopeptidase C (bleomycin hydrolase); PFAM: Peptidase C1B, bleomycin hydrolase; SPTR: Aminopeptidase C; IMG reference gene:2504105697; PFAM: Peptidase C1-like family; Belongs to the peptidase C1 family.
  
     0.514
Bcop_0742
Dipeptidyl-peptidase IV; COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; InterPro IPR002469:IPR001375; KEGG: bfs:BF0899 putative dipeptidyl peptidase; PFAM: Peptidase S9B, dipeptidylpeptidase IV N-terminal; Peptidase S9, prolyl oligopeptidase, catalytic domain; PRIAM: Dipeptidyl-peptidase IV; SPTR: Dipeptidyl peptidase IV; IMG reference gene:2504106430; PFAM: Prolyl oligopeptidase family; Dipeptidyl peptidase IV (DPP IV) N-terminal region.
  
     0.440
Bcop_2213
KEGG: bth:BT_0239 hypothetical protein; SPTR: Putative lipoprotein; IMG reference gene:2504107934.
       0.438
Bcop_1041
GumN family protein; COGs: COG3735 conserved hypothetical protein; InterPro IPR010891; KEGG: bth:BT_4316 hypothetical protein; PFAM: GumN predicted; SPTR: GumN family protein; IMG reference gene:2504106743; PFAM: GumN protein.
  
     0.425
Your Current Organism:
Bacteroides coprosuis
NCBI taxonomy Id: 679937
Other names: B. coprosuis DSM 18011, Bacteroides coprosuis DSM 18011, Bacteroides coprosuis PC139, Bacteroides coprosuis str. DSM 18011, Bacteroides coprosuis strain DSM 18011
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