STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bcop_2385Hypothetical protein; COGs: COG1373 ATPase (AAA+ superfamily); KEGG: bth:BT_1746 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504108117. (392 aa)    
Predicted Functional Partners:
Bcop_2386
COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterProIPR011895:IPR002880:IPR019752:IPR019456:IPR 001450:IPR011766; KEGG: bth:BT_1747 pyruvate-flavodoxin oxidoreductase; PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal; Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; Pyruvate-flavodoxin oxidoreductase, EKR domain; 4Fe-4S binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; PRIAM: Pyruvate dehydrogenase (NADP(+)); SMART: Pyruvate-flavodoxin oxidoreductase, EKR domain; SPTR: Pyru [...]
       0.783
Bcop_2384
KEGG: bfr:BF3327 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504108116.
 
     0.708
Bcop_1231
Protein of unknown function DUF490; InterPro IPR007452; KEGG: bth:BT_0921 hypothetical protein; PFAM: Protein of unknown function DUF490; SPTR: Putative uncharacterized protein; IMG reference gene:2504106935; PFAM: Family of unknown function (DUF490).
  
     0.493
Bcop_1075
KEGG: bfs:BF1399 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504106777.
  
     0.461
Bcop_0922
KEGG: bfs:BF1295 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504106618.
  
     0.457
Bcop_1416
KEGG: bth:BT_0519 hypothetical protein; SPTR: Hemerythrin HHE cation binding domain-containing protein; IMG reference gene:2504107125.
  
     0.443
Bcop_0259
KEGG: bth:BT_3454 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504105918.
  
     0.436
Bcop_2168
Sporulation domain-containing protein; InterPro IPR007730; KEGG: bfs:BF1670 hypothetical protein; PFAM: Sporulation-related domain; SPTR: Putative uncharacterized protein; IMG reference gene:2504107889; PFAM: Sporulation related domain.
  
     0.434
Bcop_0856
KEGG: bth:BT_4472 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504106546.
  
     0.421
Bcop_0909
KilA-N, DNA-binding domain protein; InterPro IPR018873; KEGG: bfr:BF1341 hypothetical protein; PFAM: KilA-N, DNA-binding domain; SPTR: Putative uncharacterized protein; IMG reference gene:2504106605; PFAM: ORF6N domain.
  
     0.404
Your Current Organism:
Bacteroides coprosuis
NCBI taxonomy Id: 679937
Other names: B. coprosuis DSM 18011, Bacteroides coprosuis DSM 18011, Bacteroides coprosuis PC139, Bacteroides coprosuis str. DSM 18011, Bacteroides coprosuis strain DSM 18011
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