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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Bcop_2425COGs: COG3968 Uncharacterized protein related to glutamine synthetase; InterPro IPR008146; KEGG: bfs:BF0955 glutamine synthetase; PFAM: Glutamine synthetase, catalytic domain; SPTR: Putative uncharacterized protein; IMG reference gene:2504108157; PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase type III N terminal. (729 aa)    
Predicted Functional Partners:
Bcop_1037
COGs: COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductase; InterProIPR008333:IPR001433:IPR019480:IPR013027:IPR 006004; KEGG: bfs:BF0926 putative bifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Oxidoreductase FAD/NAD(P)-binding; Oxidoreductase, FAD-binding domain; Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain; PRIAM: Glutamate synthase (NADPH); SPTR: Glutamate synthase, small subunit; TIGRFAM: Glutamate synthase (NADP [...]
    
 0.928
Bcop_0013
COGs: COG0334 Glutamate dehydrogenase/leucine dehydrogenase; InterPro IPR006097:IPR006096; KEGG: bfs:BF3437 glutamate dehydrogenase; PFAM: Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal; Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain; PRIAM: Glutamate dehydrogenase; SMART: Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal; SPTR: Putative uncharacterized protein; IMG reference gene:2504105668; PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain; Belongs to the Glu/Leu/P [...]
     
 0.875
Bcop_1027
Amidophosphoribosyltransferase; COGs: COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase; InterPro IPR000583; KEGG: bfs:BF2659 putative phosphoribosylpyrophosphate amidotransferase; PFAM: Glutamine amidotransferase, class-II; PRIAM: Amidophosphoribosyltransferase; SPTR: Putative uncharacterized protein; IMG reference gene:2504106729.
    
  0.862
murI
Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.
    
 0.859
Bcop_0193
COGs: COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ); InterProIPR006275:IPR005481:IPR005479:IPR005480:IPR 011607; KEGG: bth:BT_3866 glutamine-dependent carbamyl phosphate synthetase; PFAM: Carbamoyl-phosphate synthetase, large subunit, ATP-binding; Carbamoyl-phosphate synthase, large subunit, N-terminal; Carbamoyl-phosphate synthetase, large subunit, oligomerisation; Methylglyoxal synthase-like domain; PRIAM: Carbamoyl-phosphate synthase (ammonia); SMART: Methylglyoxal synthase-like domain; SPTR: Glutamine-dependent carbamyl phosphate synthetase; TIGRFAM: Carbamoy [...]
    
  0.857
Bcop_0400
COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterPro IPR013027:IPR004099:IPR006258; KEGG: bfs:BF0023 putative dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; PRIAM: Dihydrolipoyl dehydrogenase; SPTR: Putative dihydrolipoamide dehydrogenase; TIGRFAM: Dihydrolipoamide dehydrogenase; IMG reference gene:2504106063; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation d [...]
     
  0.857
gcvH
Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
     
  0.857
gltX
glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.
     
  0.857
Bcop_1089
COGs: COG3005 Nitrate/TMAO reductase membrane-bound tetraheme cytochrome c subunit; InterPro IPR005126:IPR017571; KEGG: pgn:PGN_1745 putative NapC/NirT cytochrome c-type protein; PFAM: NapC/NirT cytochrome c, N-terminal; SPTR: Quinol oxidase; TIGRFAM: Cytochrome c nitrate reductase, small subunit; IMG reference gene:2504106791; PFAM: NapC/NirT cytochrome c family, N-terminal region; TIGRFAM: cytochrome c nitrate reductase, small subunit.
     
  0.857
Bcop_1090
COGs: COG3303 Formate-dependent nitrite reductase periplasmic cytochrome c552 subunit; InterPro IPR003321; KEGG: bfs:BF0361 cytochrome c552; PFAM: Cytochrome c552; PRIAM: Nitrite reductase (cytochrome; ammonia-forming); SPTR: Cytochrome c-552; IMG reference gene:2504106792; PFAM: Cytochrome c552.
     
  0.857
Your Current Organism:
Bacteroides coprosuis
NCBI taxonomy Id: 679937
Other names: B. coprosuis DSM 18011, Bacteroides coprosuis DSM 18011, Bacteroides coprosuis PC139, Bacteroides coprosuis str. DSM 18011, Bacteroides coprosuis strain DSM 18011
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