Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KMV31636.1 | KMV31891.1 | AB733_04425 | AB733_03895 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.520 |
KMV31834.1 | KMV31891.1 | AB733_03445 | AB733_03895 | Arylsulfatase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.524 |
KMV31834.1 | lpxL | AB733_03445 | AB733_09660 | Arylsulfatase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Lipid A biosynthesis lauroyl acyltransferase; Catalyzes the transfer of laurate from lauroyl-acyl carrier protein (ACP) to Kdo(2)-lipid IV(A) to form Kdo(2)-(lauroyl)-lipid IV(A). | 0.643 |
KMV31891.1 | KMV31636.1 | AB733_03895 | AB733_04425 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.520 |
KMV31891.1 | KMV31834.1 | AB733_03895 | AB733_03445 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Arylsulfatase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.524 |
KMV31891.1 | flgG | AB733_03895 | AB733_16450 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Makes up the distal portion of the flagellar basal body rod; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.423 |
KMV31891.1 | flgG-2 | AB733_03895 | AB733_16955 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Makes up the distal portion of the flagellar basal body rod; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thick flagella; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.423 |
KMV31891.1 | lpxL | AB733_03895 | AB733_09660 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Lipid A biosynthesis lauroyl acyltransferase; Catalyzes the transfer of laurate from lauroyl-acyl carrier protein (ACP) to Kdo(2)-lipid IV(A) to form Kdo(2)-(lauroyl)-lipid IV(A). | 0.601 |
flgG | KMV31891.1 | AB733_16450 | AB733_03895 | Makes up the distal portion of the flagellar basal body rod; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.423 |
flgG | flgG-2 | AB733_16450 | AB733_16955 | Makes up the distal portion of the flagellar basal body rod; Derived by automated computational analysis using gene prediction method: Protein Homology. | Makes up the distal portion of the flagellar basal body rod; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thick flagella; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.616 |
flgG-2 | KMV31891.1 | AB733_16955 | AB733_03895 | Makes up the distal portion of the flagellar basal body rod; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thick flagella; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.423 |
flgG-2 | flgG | AB733_16955 | AB733_16450 | Makes up the distal portion of the flagellar basal body rod; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thick flagella; Derived by automated computational analysis using gene prediction method: Protein Homology. | Makes up the distal portion of the flagellar basal body rod; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.616 |
lpxL | KMV31834.1 | AB733_09660 | AB733_03445 | Lipid A biosynthesis lauroyl acyltransferase; Catalyzes the transfer of laurate from lauroyl-acyl carrier protein (ACP) to Kdo(2)-lipid IV(A) to form Kdo(2)-(lauroyl)-lipid IV(A). | Arylsulfatase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.643 |
lpxL | KMV31891.1 | AB733_09660 | AB733_03895 | Lipid A biosynthesis lauroyl acyltransferase; Catalyzes the transfer of laurate from lauroyl-acyl carrier protein (ACP) to Kdo(2)-lipid IV(A) to form Kdo(2)-(lauroyl)-lipid IV(A). | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.601 |