node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KMV30661.1 | acpP | AB733_10205 | AB733_00390 | dksA-type zinc finger protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.585 |
KMV30661.1 | csrA | AB733_10205 | AB733_21335 | dksA-type zinc finger protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Carbon storage regulator; A key translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Mediates global changes in gene expression, shifting from rapid growth to stress survival by linking envelope stress, the stringent response and the catabolite repression systems. Usually binds in the 5'-UTR; binding at or near the Shine-Dalgarno sequence prevents ribosome-binding, repressing translation, binding elsewhere in the 5'-UTR can activate translation and/or stabilize the mRNA. Its function is antagonized by small RNA(s). | 0.587 |
KMV30661.1 | hfq | AB733_10205 | AB733_19870 | dksA-type zinc finger protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA-binding protein Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | 0.824 |
KMV30661.1 | ihfA | AB733_10205 | AB733_01855 | dksA-type zinc finger protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Integration host factor subunit alpha; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. | 0.593 |
KMV30661.1 | rplM | AB733_10205 | AB733_13400 | dksA-type zinc finger protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.644 |
KMV30661.1 | rplU | AB733_10205 | AB733_14530 | dksA-type zinc finger protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.616 |
KMV30661.1 | rpoA | AB733_10205 | AB733_22840 | dksA-type zinc finger protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.794 |
KMV30661.1 | rpoC | AB733_10205 | AB733_16690 | dksA-type zinc finger protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.890 |
KMV30661.1 | rpoD | AB733_10205 | AB733_14730 | dksA-type zinc finger protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase subunit sigma-70; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.792 |
KMV30661.1 | rpoZ | AB733_10205 | AB733_11035 | dksA-type zinc finger protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.818 |
acpP | KMV30661.1 | AB733_00390 | AB733_10205 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | dksA-type zinc finger protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.585 |
acpP | hfq | AB733_00390 | AB733_19870 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | RNA-binding protein Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | 0.752 |
acpP | ihfA | AB733_00390 | AB733_01855 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Integration host factor subunit alpha; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. | 0.845 |
acpP | rplM | AB733_00390 | AB733_13400 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.975 |
acpP | rplU | AB733_00390 | AB733_14530 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.972 |
acpP | rpoA | AB733_00390 | AB733_22840 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.712 |
acpP | rpoZ | AB733_00390 | AB733_11035 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.410 |
csrA | KMV30661.1 | AB733_21335 | AB733_10205 | Carbon storage regulator; A key translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Mediates global changes in gene expression, shifting from rapid growth to stress survival by linking envelope stress, the stringent response and the catabolite repression systems. Usually binds in the 5'-UTR; binding at or near the Shine-Dalgarno sequence prevents ribosome-binding, repressing translation, binding elsewhere in the 5'-UTR can activate translation and/or stabilize the mRNA. Its function is antagonized by small RNA(s). | dksA-type zinc finger protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.587 |
csrA | hfq | AB733_21335 | AB733_19870 | Carbon storage regulator; A key translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Mediates global changes in gene expression, shifting from rapid growth to stress survival by linking envelope stress, the stringent response and the catabolite repression systems. Usually binds in the 5'-UTR; binding at or near the Shine-Dalgarno sequence prevents ribosome-binding, repressing translation, binding elsewhere in the 5'-UTR can activate translation and/or stabilize the mRNA. Its function is antagonized by small RNA(s). | RNA-binding protein Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | 0.855 |
csrA | ihfA | AB733_21335 | AB733_01855 | Carbon storage regulator; A key translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Mediates global changes in gene expression, shifting from rapid growth to stress survival by linking envelope stress, the stringent response and the catabolite repression systems. Usually binds in the 5'-UTR; binding at or near the Shine-Dalgarno sequence prevents ribosome-binding, repressing translation, binding elsewhere in the 5'-UTR can activate translation and/or stabilize the mRNA. Its function is antagonized by small RNA(s). | Integration host factor subunit alpha; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. | 0.837 |