Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEH31603.1 | SEH31605.1 | SAMN05421593_1498 | SAMN05421593_1499 | Phenazine biosynthesis protein PhzF family. | Transcriptional regulator, AraC family. | 0.544 |
SEH31603.1 | SEH31609.1 | SAMN05421593_1498 | SAMN05421593_1500 | Phenazine biosynthesis protein PhzF family. | Hypothetical protein. | 0.470 |
SEH31603.1 | SEH39926.1 | SAMN05421593_1498 | SAMN05421593_3709 | Phenazine biosynthesis protein PhzF family. | Carboxypeptidase PM20D1. | 0.538 |
SEH31603.1 | lysA | SAMN05421593_1498 | SAMN05421593_3922 | Phenazine biosynthesis protein PhzF family. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.572 |
SEH31605.1 | SEH31603.1 | SAMN05421593_1499 | SAMN05421593_1498 | Transcriptional regulator, AraC family. | Phenazine biosynthesis protein PhzF family. | 0.544 |
SEH31605.1 | SEH31609.1 | SAMN05421593_1499 | SAMN05421593_1500 | Transcriptional regulator, AraC family. | Hypothetical protein. | 0.658 |
SEH31609.1 | SEH31603.1 | SAMN05421593_1500 | SAMN05421593_1498 | Hypothetical protein. | Phenazine biosynthesis protein PhzF family. | 0.470 |
SEH31609.1 | SEH31605.1 | SAMN05421593_1500 | SAMN05421593_1499 | Hypothetical protein. | Transcriptional regulator, AraC family. | 0.658 |
SEH39926.1 | SEH31603.1 | SAMN05421593_3709 | SAMN05421593_1498 | Carboxypeptidase PM20D1. | Phenazine biosynthesis protein PhzF family. | 0.538 |
SEH39926.1 | lysA | SAMN05421593_3709 | SAMN05421593_3922 | Carboxypeptidase PM20D1. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.548 |
lysA | SEH31603.1 | SAMN05421593_3922 | SAMN05421593_1498 | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | Phenazine biosynthesis protein PhzF family. | 0.572 |
lysA | SEH39926.1 | SAMN05421593_3922 | SAMN05421593_3709 | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | Carboxypeptidase PM20D1. | 0.548 |