Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEH29732.1 | SEH35738.1 | SAMN05421593_1161 | SAMN05421593_3151 | Hypothetical protein. | Hypothetical protein. | 0.912 |
SEH29732.1 | SEH48736.1 | SAMN05421593_1161 | SAMN05421593_0061 | Hypothetical protein. | NADH dehydrogenase subunit M. | 0.923 |
SEH29732.1 | SEH48772.1 | SAMN05421593_1161 | SAMN05421593_0067 | Hypothetical protein. | NADH dehydrogenase subunit G. | 0.982 |
SEH29732.1 | SEH48786.1 | SAMN05421593_1161 | SAMN05421593_0069 | Hypothetical protein. | NADH dehydrogenase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. | 0.968 |
SEH29732.1 | SEH48791.1 | SAMN05421593_1161 | SAMN05421593_0070 | Hypothetical protein. | NADH dehydrogenase subunit E. | 0.975 |
SEH29732.1 | SEH48802.1 | SAMN05421593_1161 | SAMN05421593_0072 | Hypothetical protein. | NADH dehydrogenase subunit C; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 30 kDa subunit family. | 0.973 |
SEH29732.1 | nuoA | SAMN05421593_1161 | SAMN05421593_0074 | Hypothetical protein. | NADH dehydrogenase subunit A; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family. | 0.939 |
SEH29732.1 | nuoB | SAMN05421593_1161 | SAMN05421593_0073 | Hypothetical protein. | NADH dehydrogenase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. | 0.959 |
SEH29732.1 | nuoD | SAMN05421593_1161 | SAMN05421593_0071 | Hypothetical protein. | NADH dehydrogenase subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family. | 0.976 |
SEH32840.1 | SEH35738.1 | SAMN05421593_1978 | SAMN05421593_3151 | Hypothetical protein. | Hypothetical protein. | 0.912 |
SEH32840.1 | SEH48736.1 | SAMN05421593_1978 | SAMN05421593_0061 | Hypothetical protein. | NADH dehydrogenase subunit M. | 0.923 |
SEH32840.1 | SEH48772.1 | SAMN05421593_1978 | SAMN05421593_0067 | Hypothetical protein. | NADH dehydrogenase subunit G. | 0.982 |
SEH32840.1 | SEH48786.1 | SAMN05421593_1978 | SAMN05421593_0069 | Hypothetical protein. | NADH dehydrogenase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. | 0.968 |
SEH32840.1 | SEH48791.1 | SAMN05421593_1978 | SAMN05421593_0070 | Hypothetical protein. | NADH dehydrogenase subunit E. | 0.975 |
SEH32840.1 | SEH48802.1 | SAMN05421593_1978 | SAMN05421593_0072 | Hypothetical protein. | NADH dehydrogenase subunit C; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 30 kDa subunit family. | 0.973 |
SEH32840.1 | nuoA | SAMN05421593_1978 | SAMN05421593_0074 | Hypothetical protein. | NADH dehydrogenase subunit A; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family. | 0.939 |
SEH32840.1 | nuoB | SAMN05421593_1978 | SAMN05421593_0073 | Hypothetical protein. | NADH dehydrogenase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. | 0.959 |
SEH32840.1 | nuoD | SAMN05421593_1978 | SAMN05421593_0071 | Hypothetical protein. | NADH dehydrogenase subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family. | 0.976 |
SEH35738.1 | SEH29732.1 | SAMN05421593_3151 | SAMN05421593_1161 | Hypothetical protein. | Hypothetical protein. | 0.912 |
SEH35738.1 | SEH32840.1 | SAMN05421593_3151 | SAMN05421593_1978 | Hypothetical protein. | Hypothetical protein. | 0.912 |
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