STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEH41888.1Hypothetical protein. (242 aa)    
Predicted Functional Partners:
SEH36802.1
Hypothetical protein.
  
     0.772
SEH41894.1
Predicted PurR-regulated permease PerM.
       0.745
SEH32220.1
PAP2 superfamily protein.
  
     0.732
SEH41904.1
Hypothetical protein; Manually curated.
       0.724
SEH35987.1
Hypothetical protein.
  
     0.722
SEH44847.1
Hypothetical protein.
  
     0.711
SEH42721.1
Hypothetical protein.
  
     0.695
SEH37613.1
Hypothetical protein.
  
     0.694
SEH39812.1
Hypothetical protein.
  
     0.691
SEH35190.1
Hypothetical protein.
  
     0.686
Your Current Organism:
Chryseobacterium culicis
NCBI taxonomy Id: 680127
Other names: C. culicis, CCM 7716, Chryseobacterium culicis Kampfer et al. 2010, Chryseobacterium sp. R4-1A, DSM 23031, LMG 25442, LMG:25442, strain R4-1A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.