Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
SCAB_0261Conserved hypothetical protein; PMID:12127493; TTA-Leu codon(s) 4, 87, 403 may indicate regulation by BldA. (442 aa)    
Predicted Functional Partners:
CBG71313.1
Conserved hypothetical protein.
 
     0.747
CBG75396.1
Putative siderophore biosynthesis protein; PMID: 14617658.
  
     0.727
SCAB_3611
Putative integral membrane protein; TTA-Leu codon(s) 21 may indicate regulation by BldA.
  
     0.696
CBG75395.1
Conserved hypothetical protein.
  
     0.693
CBG73750.1
Conserved hypothetical protein.
 
     0.689
CBG69266.1
Putative phosphotransferase.
 
     0.676
CBG74435.1
Putative phosphotransferase.
  
     0.664
CBG74229.1
Putative ATPase.
  
     0.663
CBG75397.1
Putative siderophore biosynthesis protein; PMID: 11481432.
  
     0.658
CBG68966.1
Putative siderophore biosynthesis protein; Possible NIS system, nearby genes SCAB18311, SCAB18321 for AMP catabolism.
  
     0.642
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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