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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCAB_0331Putative serine/threonine protein kinase. (550 aa)    
Predicted Functional Partners:
CBG71611.1
Putative protein phosphatase.
 
 
 0.836
CBG73363.1
Putative regulatory protein; PMID:15563836.
 
 
 0.823
CBG71101.1
Putative serine/threonine protein kinase; TTA-Leu codon(s) 561 may indicate regulation by BldA.
  
   
 0.754
CBG71655.1
Conserved hypothetical protein.
  
     0.650
CBG74602.1
Conserved hypothetical protein.
 
 
 
 0.637
CBG72956.1
Conserved hypothetical protein.
 
   0.593
CBG73769.1
Putative serine/threonine protein kinase.
 
 
0.550
CBG71583.1
Putative beta-lactam-binding protein kinase.
 
 
0.548
CBG71617.1
Putative penicillin-binding kinase.
 
 
0.548
SCAB_0931
Putative serine/threonine protein kinase.
 
 
0.546
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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