Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SCAB_0551Putative secreted solute-binding protein (transport system associated). (455 aa)    
Predicted Functional Partners:
SCAB_0571
Putative probable transmembrane transport protein.
 
 
 0.679
SCAB_0561
Putative binding protein dependent transport protein.
  
 
 0.623
msiK
Putative maltose/cellubiose ABC transporter ATP-binding subunit; PMID: 9068663; PMID: 7494485; Belongs to the ABC transporter superfamily.
  
 
 0.576
SCAB_8191
Putative substrate-binding component of ABC transporter.
  
     0.572
CBG70101.1
Putative extracellular substrate-binding protein.
  
     0.562
CBG68694.1
Putative extracellular solute-binding transport protein.
  
     0.547
CBG73956.1
Putative secreted substrate-binding transport protein.
  
     0.491
CBG74705.1
Putative secreted substrate-binding protein (transport system associated).
  
     0.484
CBG73955.1
Putative secreted substrate-binding transport protein.
  
     0.478
CBG72591.1
Putative binding-protein-dependent transporter.
 
 
 0.461
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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