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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCAB_0551Putative secreted solute-binding protein (transport system associated). (455 aa)    
Predicted Functional Partners:
SCAB_0571
Putative probable transmembrane transport protein.
 
 
 0.683
SCAB_0561
Putative binding protein dependent transport protein.
  
 
 0.628
SCAB_8191
Putative substrate-binding component of ABC transporter.
  
   
 0.576
CBG70101.1
Putative extracellular substrate-binding protein.
  
   
 0.566
CBG68694.1
Putative extracellular solute-binding transport protein.
  
   
 0.551
msiK
Putative maltose/cellubiose ABC transporter ATP-binding subunit; PMID: 9068663; PMID: 7494485; Belongs to the ABC transporter superfamily.
  
 
 0.542
CBG73956.1
Putative secreted substrate-binding transport protein.
  
   
 0.495
CBG74705.1
Putative secreted substrate-binding protein (transport system associated).
  
   
 0.488
CBG73955.1
Putative secreted substrate-binding transport protein.
  
   
 0.482
CBG72591.1
Putative binding-protein-dependent transporter.
 
 
 0.465
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.