Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
SCAB_0571Putative probable transmembrane transport protein. (279 aa)    
Predicted Functional Partners:
SCAB_0561
Putative binding protein dependent transport protein.
 
 0.992
msiK
Putative maltose/cellubiose ABC transporter ATP-binding subunit; PMID: 9068663; PMID: 7494485; Belongs to the ABC transporter superfamily.
 
 0.973
CBG75608.1
Putative sugar-transporter integral membrane protein.
 
 0.969
CBG75424.1
Putative binding-protein-dependent transport protein.
 
 0.967
CBG69206.1
Putative binding-protein dependent transport system integral membrane subunit; PMID:11178732.
 
 0.965
CBG75920.1
Putative binding protein dependent transport protein.
 
 0.964
CBG75176.1
Putative integral membrane transport protein.
 
 
 0.851
CBG69220.1
Probable transmembrane transport protein.
 
 
 0.848
SCAB_8181
Putative integral membrane binding-protein-dependent transport protein.
 
 
 0.847
CBG72964.1
Putative binding-protein-dependent transporter integral membrane subunit.
 
 
 0.844
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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