Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SCAB_0701Putative IS transposase; PMID:15686551; overlaps 0692 maybe pseudo; strong match to gene on S. turgidiscabies PAI. (234 aa)    
Predicted Functional Partners:
SCAB_1001
Putative mini-circle(IS117)-related transposase; PMID:2575701; PMID: 15686551.
 
     0.976
CBG70424.1
Putative transposase; PMID: 10658661; PMID: 1700062; PMID: 10217489; see also SCAB14321, SCAB21921, SCAB77071; 50% identity to transposases on S. turgidiscabies PAI.
  
     0.770
CBG68581.1
Putative transposase.
  
     0.718
SCAB_0692
Conserved hypothetical protein; Possible coiled-coil region aa23-52; overlaps see SCAB0691 putative IS transposase.
       0.564
CBG68607.1
Conserved hypothetical protein.
  
     0.434
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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