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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCAB_0761Putative oxidoreductase. (166 aa)    
Predicted Functional Partners:
SCAB_0741
Hypothetical protein; No significant db matches.
       0.827
SCAB_0751
Putative AMP-binding protein; PMID:10930733; PMID:11048953; domain prediction suggests cds may be fragment of secondary metabolism biosynthesis cluster see also SCAB0731, SCAB0721; Belongs to the ATP-dependent AMP-binding enzyme family.
       0.827
CBG68357.1
Putative oxidoreductase; PMID:15797213; PMID: 14528002.
  
     0.774
CBG68551.1
PROBABLE OXIDOREDUCTASE.
  
     0.773
SCAB_0731
Putative phosphopantetheinyl transferase; PMID:11390684; domain prediction suggests cds may be fragment of secondary metabolism biosynthesis cluster see also SCAB0721, SCAB0751; Belongs to the P-Pant transferase superfamily.
       0.766
CBG68655.1
Putative POSSIBLE OXIDOREDUCTASE.
  
     0.682
SCAB_0771
Putative aminotransferase; PMID:15128576; related to ectoine biosynthesis aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
       0.601
SCAB_0721
Putative oxidoreductase; PF00441 and PF08028 fatty acid oxidation; may suggest role in secondary metabolite synthesis for instance PMID: 15942003.
  
  
 0.547
SCAB_0781
Putative LysE type efflux protein.
       0.401
CBG68538.1
POSSIBLE OXIDOREDUCTASE.
 
  
 0.400
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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