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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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textmining
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SCAB_1001Putative mini-circle(IS117)-related transposase; PMID:2575701; PMID: 15686551. (238 aa)    
Predicted Functional Partners:
SCAB_0701
Putative IS transposase; PMID:15686551; overlaps 0692 maybe pseudo; strong match to gene on S. turgidiscabies PAI.
 
     0.976
SCAB_0991
Putative IS transposase; PMID:1332944; see also SCAB0371, SCAB0691, SCAB23721, SCAB42901, SCAB90821; TTA-Leu codon(s) 4 may indicate regulation by BldA.
       0.723
CBG74678.1
Putative transposase; PMID:15686551; PMID:2555783; PMID:16699579; PMID:1700062; PMID:16632251; see also SCAB14321, SCAB21921, SCAB33271; 99% identity with transposase on S. turgidiscabies PAI; TTA-Leu codon(s) 120 may indicate regulation by BldA.
  
     0.714
CBG70424.1
Putative transposase; PMID: 10658661; PMID: 1700062; PMID: 10217489; see also SCAB14321, SCAB21921, SCAB77071; 50% identity to transposases on S. turgidiscabies PAI.
  
     0.690
CBG69307.1
Putative transposase; PMID:16305230; PMID: 2821490; see also SCAB14321, SCAB33271, SCAB77071; strong blastn hit to S. turgidiscabies PAI; 36% aa_id to transposase on S. turgidiscabies PAI.
  
     0.668
CBG68582.1
Putative transposase; PMID:16305230; PMID: 2821490; see also SCAB21921, SCAB33271, SCAB77071; strong blastn hits to S. turgidiscabies PAI, 36% aa_id to transposase on S. turgidiscabies PAI.
  
     0.665
norM
Multidrug resistance protein.
  
     0.493
SCAB_6031
Conserved hypothetical protein.
  
    0.481
CBG68581.1
Putative transposase.
  
     0.463
CBG71312.1
Conserved hypothetical protein.
  
     0.447
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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