Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SCAB_1041Putative ABC transport system integral membrane protein (fragment). (97 aa)    
Predicted Functional Partners:
SCAB_1051
Putative ABC transport system ATP binding protein.
  
 
 0.947
CBG71085.1
Putative ABC transporter ATP-binding subunit.
  
 
 0.909
CBG71094.1
Putative ABC transporter ATP-binding subunit.
  
 
 0.905
CBG69691.1
Putative ABC transporter.
  
 
 0.903
CBG70459.1
Putative ABC transporter ATP-binding subunit.
  
 
 0.903
CBG70541.1
Putative ABC transporter ATP-binding subunit.
  
 
 0.903
SCAB_4851
ABC-transporter ATP binding protein.
  
 
 0.903
SCAB_4861
Putative ABC transporter ATP-binding protein.
  
 
 0.903
CBG71949.1
Putative ABC transporter ATP-binding subunit.
  
 
 0.903
CBG72462.1
Putative ABC transport system ATP-binding subunit.
  
 
 0.903
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
Server load: low (22%) [HD]