Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SCAB_1071Putative two component system sensor kinase. (411 aa)    
Predicted Functional Partners:
SCAB_1061
Putative two component system response regulator.
 
 
 0.951
CBG75816.1
Putative two component system response regulator.
 
 
 0.807
CBG71276.1
Putative two component system response regulator.
 
 
 0.793
CBG71278.1
Putative two component system response regulator.
 
 
 0.793
CBG71042.1
Putative two component system response regulator.
 
   0.782
CBG71435.1
Putative two component response regulator.
 
   0.773
SCAB_5591
Putative two-component system response regulator; PMID:16723573.
 
   0.771
SCAB_2801
Putative two-component system response regulator.
 
   0.766
CBG74322.1
Putative two-component response regulator.
 
   0.765
CBG75789.1
Putative two-component response regulator.
 
   0.764
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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