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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCAB_1071Putative two component system sensor kinase. (411 aa)    
Predicted Functional Partners:
SCAB_1061
Putative two component system response regulator.
 
 
 0.952
CBG75816.1
Putative two component system response regulator.
 
 
 0.809
CBG71276.1
Putative two component system response regulator.
 
 
 0.794
CBG71278.1
Putative two component system response regulator.
 
 
 0.794
CBG71042.1
Putative two component system response regulator.
 
 
 0.780
CBG71435.1
Putative two component response regulator.
 
 
 0.770
SCAB_5591
Putative two-component system response regulator; PMID:16723573.
 
 
 0.768
SCAB_2801
Putative two-component system response regulator.
 
 
 0.763
CBG74322.1
Putative two-component response regulator.
 
 
 0.762
CBG75789.1
Putative two-component response regulator.
 
 
 0.761
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.