Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CBG68278.1Probable oxidoreductase. (486 aa)    
Predicted Functional Partners:
CBG70083.1
Putative 2-oxoglutarate dehydrogenase.
  
 0.992
CBG73704.1
Putative dihydrolipoyllysine-residue succinyltransferase; PMID:8504804; pair of direct repeats and Pro/Ala tract (entirely G/C).
 0.854
bkdB
E1-beta branched-chain alpha keto acid dehydrogenase; PMID: 8002616.
 
 0.830
pdhB
PROBABLE PYRUVATE DEHYDROGENASE E1 COMPONENT (BETA SUBUNIT) PDHB (PYRUVATE DECARBOXYLASE) (PYRUVATE DEHYDROGENASE) (PYRUVIC DEHYDROGENASE).
 
 0.826
bkdG
E1-beta branched-chain alpha-keto-acid dehydrogenase system; PMID: 7768860; PMID:15328113.
 
 0.825
trxA3
Thioredoxin; Belongs to the thioredoxin family.
  
 
 0.809
bkdH
E2 branched-chain alpha keto acid dehydrogenase system; PMID: 7768860; PMID:15328113.
 
 0.802
bkdC
E2 branched-chain alpha keto acid dehydrogenase; PMID: 8002616.
 0.802
CBG75714.1
Putative dihydrolipoamide acyltransferase component E2.
 
 0.796
gcvH
Putative glycine cleavage H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
 
 
 0.740
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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