STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBG68301.1Putative iron-sulfur protein; PMID:12819191; PMID: 1846297; many other streptomycete matches. (63 aa)    
Predicted Functional Partners:
CBG68300.1
PUTATIVE FERREDOXIN REDUCTASE.
 
   
 0.821
CBG68302.1
Putative P450-like protein; Belongs to the cytochrome P450 family.
 
  
 0.817
CBG68299.1
Putative short-chain dehydrogenase.
       0.773
CBG68297.1
Conserved hypothetical protein (contains NHL repeats).
 
     0.651
CBG68298.1
Putative monooxygenase.
 
     0.631
CBG72392.1
Putative detoxifying phosphotransferase.
  
     0.575
CBG68296.1
Putative MarR family transcriptional regulator.
       0.552
CBG74679.1
Conserved hypothetical protein.
  
     0.455
CBG71467.1
Putative monooxgenase; PMID:16428858; PMID: 7737473; PMID:15561847; Belongs to the cytochrome P450 family.
 
  
 0.444
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.