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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBG68383.1Putative transport system peptide-binding protein; Cluster 0360 with SCAB31431. (496 aa)    
Predicted Functional Partners:
CBG70244.1
Putative transport system integral membrane protein.
 
 
 0.984
CBG70243.1
Putative transport system substrate-binding protein.
 
 0.983
CBG70242.1
Putative oligopeptide ABC transporter; Belongs to the ABC transporter superfamily.
 
 
 0.982
CBG70241.1
Putative oligopeptide ABC transporter; Belongs to the ABC transporter superfamily.
 
 
 0.978
CBG70245.1
Putative transport system peptide-binding protein; Cluster 0360 with SCAB12151.
  
  
 
0.911
CBG75592.1
Putative oligopeptide transport system (integral membrane and ATP-binding proteins); Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.890
SCAB_3761
Putative oligopeptide transport system (integral membrane and ATP-binding proteins).
 
  
 0.871
SCAB_8731
Putative transport system permease protein.
 
  
 0.850
SCAB_6811
Putative integral membrane transport protein.
 
  
 0.835
SCAB_3771
Putative ABC transporter integral membrane protein.
 
  
 0.821
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.