Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CBG68417.1Putative secreted oxidoreductase. (388 aa)    
Predicted Functional Partners:
CBG68419.1
Putative secreted oxidase.
 0.998
CBG68420.1
Putative dihydropicolinate synthase; Belongs to the DapA family.
 
  
 0.994
CBG68418.1
Conserved hypothetical protein.
 
    0.970
CBG68421.1
Conserved hypothetical protein; Belongs to the proline racemase family.
 
  
 0.943
CBG68479.1
Putative D-amino acid oxidase.
     
  0.900
CBG68422.1
Putative gntR-family regulatory protein.
  
 0.839
prdF
Putative proline racemase; Belongs to the proline racemase family.
 
  
 0.754
soxG
Putative sarcosine oxidase gamma subunit.
  
 
 0.569
CBG68681.1
Conserved hypothetical protein; PMID:12725858.
  
    0.530
CBG68416.1
Hypothetical protein; No significant db matches.
       0.517
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.