Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CBG68434.1Conserved hypothetical protein. (392 aa)    
Predicted Functional Partners:
gdhA
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
     
 0.754
CBG68442.1
Conserved hypothetical protein.
     
 0.747
CBG68436.1
Putative transcriptional regulator.
  
    0.716
CBG68444.1
Putative secreted peptidase.
     
 0.634
CBG68898.1
Putative phosphatidylserine synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
     0.563
CBG68446.1
Conserved hypothetical protein; PMID:15123265.
     
 0.561
CBG70642.1
Putative integral membrane phosphoesterase.
 
    0.561
CBG72031.1
Conserved hypothetical protein.
       0.526
CBG68432.1
RarB (conservon) homolog; PMID: 12657469; partial conservon.
       0.508
CBG68897.1
Putative decarboxylase.
 
 
   0.482
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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