Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CBG68511.1Putative copper oxidase. (355 aa)    
Predicted Functional Partners:
CBG68513.1
Putative glycosyl hydrolase.
 
    0.932
CBG68512.1
Conserved hypothetical protein; TTA-Leu codon(s) 9 may indicate regulation by BldA.
 
     0.915
CBG75148.1
Putative PROBABLE CONSERVED INTEGRAL MEMBRANE TRANSPORT PROTEIN.
  
  
 0.795
CBG69092.1
Putative pyridoxal-phosphate dependent enzyme.
  
  
 0.710
CBG75150.1
Putative cysteine synthase.
  
  
 0.710
cysK2
S-sulfo-L-cysteine synthase (3-phospho-L-serine-dependent); POSSIBLE CYSTEINE SYNTHASE A CYSK2 (O-ACETYLSERINE SULFHYDRYLASE) (O-ACETYLSERINE (THIOL)-LYASE) (CSASE).
  
  
 0.710
SCAB_0881
Putative sensor kinase.
  
 
 0.709
CBG69568.1
Conserved hypothetical protein.
  
 
 0.709
CBG70082.1
Putative two-component system sensor kinase.
  
 
 0.709
tatC
Putative protein translocation system component; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.
    
 
 0.607
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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