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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBG68517.1Putative glutathione-dependent aldehyde dehydrogenase. (399 aa)    
Predicted Functional Partners:
CBG68196.1
Putative zinc-binding alcohol dehydrogenase.
  
     0.623
CBG75037.1
Putative oxidoreductase.
 
    0.606
CBG68518.1
Putative secreted protein.
  
    0.592
CBG72853.1
Putative iron-sulfur binding oxidoreductase.
 
  
 0.514
katE
Catalase HPII; Serves to protect cells from the toxic effects of hydrogen peroxide.
 
 
 0.480
CBG75512.1
Conserved hypothetical protein.
 
    0.405
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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