Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CBG68572.1Putative ABC transporter ATP-binding subunit; Belongs to the ABC transporter superfamily. (263 aa)    
Predicted Functional Partners:
CBG68570.1
ABC transporter permease protein.
 
 0.989
SCAB_8731
Putative transport system permease protein.
 
 
 0.988
SCAB_6811
Putative integral membrane transport protein.
 
 
 0.987
CBG68569.1
Putative oligopeptide transport system permease protein.
 
 
 0.978
CBG68568.1
Putative ABC transporter secreted binding protein.
 
 
 0.950
CBG69844.1
Oligopeptide transport integral membrane protein.
 
 0.950
CBG70243.1
Putative transport system substrate-binding protein.
 
 0.931
CBG70246.1
Dipeptide binding-protein-dependent transport system.
 
 0.922
bldKA
Putative BldKA-like ABC transport system integral membrane protein; PMID: 8971710; PMID: 16006069.
 
 0.920
CBG68571.1
Putative oligopeptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
0.912
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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