Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CBG68602.1Putative P450-like protein; Belongs to the cytochrome P450 family. (419 aa)    
Predicted Functional Partners:
CBG71460.1
Putative polyketide synthase; PMID:14652074; PMID:10767533; many ~30% similar.
  
 0.856
CBG75343.1
Putative type I polyketide synthase; PMID:16207901; PMID:16079135; PMID:11358695.
  
 0.795
CBG69902.1
Putative monoxygenase; Belongs to the cytochrome P450 family.
  
     0.737
txtB
Thaxtomin synthetase B; PMID: 11115114; PMID: 15686551; PMID: 10780924; thaxtomin synthesis - pathogenicity associated.
  
 0.717
txtA
PMID: 11115114; PMID: 15686551; thaxtomin synthesis - pathogenicity associated.
  
 0.717
CBG68675.1
Iron-sulfur oxidoreductase beta subunit.
 
 0.654
SCAB_1471
Putative non-ribosomal peptide synthase; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
 0.636
CBG75339.1
Putative type I polyketide synthase; PMID:16207901; PMID:16085885; PMID:11094342; PMID:14652074; PMID:10873841; PMID:16806745; TTA-Leu codon(s) 962 may indicate regulation by BldA.
  
 0.600
CBG74684.1
Conserved hypothetical protein.
 
    0.505
SCAB_9321
P450-like protein; Belongs to the cytochrome P450 family.
  
 
 
 0.470
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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