STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBG68626.1Putative PROBABLE SHORT-CHAIN TYPE DEHYDROGENASE/REDUCTASE. (521 aa)    
Predicted Functional Partners:
SCAB_2691
Putative 3-oxoacyl-[acyl-carrier protein] reductase.
 
    0.769
CBG75087.1
Putative dehydrogenase/reductase.
 
    0.769
CBG75969.1
Probable oxidoreductase.
 
    0.768
CBG75973.1
Putative 3-oxoacyl-[acyl-carrier protein] reductase.
 
    0.763
CBG68619.1
Putative oxidoreductase.
 
    0.761
CBG73870.1
Putative dehydrogenase.
 
    0.742
CBG73970.1
Putative reductase.
 
    0.733
hcaB
2,3-dihydroxy-2,3-dihydrophenylpropionatedehydr og enase; Annotation transferred from E. coli; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
    0.726
CBG68741.1
Putative short-chain dehydrogenase/reductase.
 
    0.711
CBG72200.1
Putative oxidoreductase.
 
    0.700
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.