Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CBG68676.1Putative IclR-family transcriptional regulator. (279 aa)    
Predicted Functional Partners:
CBG74349.1
Urea carboxylase.
  
    0.795
CBG74573.1
Conserved hypothetical protein.
  
    0.788
CBG75026.1
Putative transcriptional regulator.
  
     0.769
CBG71686.1
Putative transcriptional regulator; PMID:10986257.
  
     0.590
CBG75740.1
Conserved hypothetical protein.
  
     0.489
CBG72658.1
Conserved hypothetical protein.
  
     0.449
CBG68523.1
Putative 3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase.
 
   
 0.441
CBG68280.1
Putative p-hydroxybenzoate hydroxylase.
 
   
 0.428
CBG68677.1
Putative ABC transporter, substrate binding protein.
       0.416
CBG72768.1
Putative IclR-family transcriptional regulator; PMID:1695735; PMID:10986257; PMID:12562798.
  
     0.415
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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