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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBG68684.1Putative integral membrane protein. (402 aa)    
Predicted Functional Partners:
CBG68683.1
Conserved hypothetical protein; TTA-Leu codon(s) 110 may indicate regulation by BldA.
 
     0.951
CBG68685.1
Putative secreted protein.
       0.796
CBG71048.1
Putative secreted protein.
  
     0.757
CBG74375.1
Putative membrane protein.
  
     0.750
CBG70534.1
Putative membrane protein.
  
     0.749
CBG72059.1
Putative integral membrane protein.
  
     0.736
CBG69924.1
Putative membrane-bound hydrophilic protein.
  
     0.734
CBG72427.1
Putative membrane protein; Possibly subunit of ATP transporter system.
  
     0.732
CBG71550.1
Conserved hypothetical protein.
  
     0.724
CBG73622.1
Conserved hypothetical protein.
  
     0.721
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.