Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CBG68696.1Putative integral membrane transport protein. (289 aa)    
Predicted Functional Partners:
CBG68695.1
Putative integral membrane transport protein.
 
  0.995
CBG68694.1
Putative extracellular solute-binding transport protein.
 
 0.988
msiK
Putative maltose/cellubiose ABC transporter ATP-binding subunit; PMID: 9068663; PMID: 7494485; Belongs to the ABC transporter superfamily.
 
 0.974
SCAB_2411
Putative sugar transport permease.
 
  0.967
CBG72799.1
Putative cellobiose binding-protein-dependent transport system; PMID:10347054.
 
  0.967
CBG74695.1
Putative binding-protein-dependent transport system transmembrane component; PMID:10347054.
 
  0.966
SCAB_2421
Putative solute binding lipoprotein.
 
 0.891
CBG72800.1
Putative secreted cellobiose-binding (transport system associated); PMID:10347054.
 
 0.891
CBG74696.1
Putative secreted substrate-binding protein (transport system associated).
 
 0.882
CBG75608.1
Putative sugar-transporter integral membrane protein.
 
 
 0.850
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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