STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBG68698.1Putative beta-galatosidase. (985 aa)    
Predicted Functional Partners:
CBG73393.1
Putative aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 
 
 0.935
CBG71289.1
Conserved hypothetical protein.
  
 
 0.912
aga
Putative alpha-galactosidase.
 
 
 0.875
CBG68391.1
Putative glycosylhyrdolase.
 
 
 0.858
xylA
Xylose isomerase; Belongs to the xylose isomerase family.
    
 0.816
CBG69063.1
Putative oxidoreductase.
    
  0.804
CBG68697.1
Putative phosphodiesterase.
       0.793
CBG69162.1
Putative glycosyl hydrolase (family 42).
 
 
 0.766
CBG69161.1
Putative glycosyl hydrolase (family 35); Belongs to the glycosyl hydrolase 35 family.
 
 
 0.764
SCAB_3891
Probable secreted alpha-galactosidase.
 
 
 0.755
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.