Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CBG68797.1Putative transposase; PMID:16208464; PMID:14702401; cluster 0034: SCAB14601, SCAB16631, SCAB24421, SCAB30531, SCAB30841, SCAB68821, SCAB87301; found near at least 2 antibiotic biosynthesis clusters. (135 aa)    
Predicted Functional Partners:
CBG68798.1
Putative transposase related protein; PMID:16208464; PMID:14702401; cluster 0050 6: SCAB16641, SCAB24431, SCAB30541, SCAB30831, SCAB68821, SCAB87291.
    0.919
CBG69555.1
Putative transposase; PMID:16208464; cluster 0034: SCAB14601, SCAB16631, SCAB24431, SCAB30531, SCAB30841, SCAB68821, SCAB87301; cluster 0050 6: SCAB16641, SCAB24431, SCAB30541, SCAB30831, SCAB68821, SCAB87291.
    0.783
CBG70159.1
Putative insertion element transposase; PMID: 16208464; cluster 0050 6: SCAB16641, SCAB24431, SCAB30541, SCAB30831, SCAB68821, SCAB87291.
    0.783
CBG70185.1
Putative insertion element transposase; PMID: 16208464; cluster 0050 6: SCAB16641, SCAB24431, SCAB30541, SCAB30831, SCAB68821, SCAB87291.
    0.783
CBG75668.1
Putative transposase; PMID:16208464; cluster 0050 6: SCAB16641, SCAB24431, SCAB30541, SCAB30831, SCAB68821, SCAB87291.
    0.783
CBG75109.1
Putative transposase fragment; Pseudo: looks like fragment.
  
    0.510
CBG68799.1
Putative secreted protein.
       0.425
SCAB_0471
Conserved hypothetical protein, IS-associated; PMID:16208464; PMID:1650732; see SCAB0461; TTA-Leu codon(s) 12 may indicate regulation by BldA.
  
     0.411
CBG71719.1
Conserved hypothetical protein; PMID:16208464; TTA-Leu codon(s) 12 may indicate regulation by BldA.
  
     0.411
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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