Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SCAB_1671Putative adenylation protein; PMID:9006024; PMID:15569690. (527 aa)    
Predicted Functional Partners:
CBG68372.1
Putative isochorismatase; PMID:11591691; PMID:11029592; PMID:8550523; PMID:2521622.
 
 
 0.987
SCAB_1481
Putative non-ribosomal peptide synthase component.
 
 
0.986
txtA
PMID: 11115114; PMID: 15686551; thaxtomin synthesis - pathogenicity associated.
 
  
0.950
txtB
Thaxtomin synthetase B; PMID: 11115114; PMID: 15686551; PMID: 10780924; thaxtomin synthesis - pathogenicity associated.
 
  
0.949
SCAB_1471
Putative non-ribosomal peptide synthase; Belongs to the ATP-dependent AMP-binding enzyme family.
 
  
0.905
CBG75343.1
Putative type I polyketide synthase; PMID:16207901; PMID:16079135; PMID:11358695.
 
  
 0.902
CBG69089.1
Putative NRPS-related protein.
 
  
0.880
CBG75491.1
Putative MbtH homolog.
 
  
 0.880
txtH
Hypothetical protein; Pseudo: missing stop codon.
 
  
 0.878
SCAB_1381
Putative salicylate synthase; TTA-Leu codon(s) 153 may indicate regulation by BldA.
 
  
 0.876
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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