STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBG68882.1Conserved hypothetical protein. (241 aa)    
Predicted Functional Partners:
CBG68883.1
Conserved hypothetical protein.
 
     0.801
CBG70524.1
Putative regulatory protein; PMID: 10517581; PMID: 15921897.
 
     0.700
SCAB_5001
Conserved hypothetical protein; PMID:16208464.
 
     0.663
SCAB_7681
Conserved hypothetical protein.
  
     0.612
CBG68881.1
Putative transport associated protein.
       0.597
CBG71048.1
Putative secreted protein.
  
     0.573
CBG74790.1
Conserved hypothetical protein.
  
     0.564
CBG69125.1
Putative phosphotransferase.
  
     0.562
CBG73551.1
Putative integral membrane protein.
 
    0.562
obg
GTP-binding protein; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.
   
  
 0.560
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.