STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBG68883.1Conserved hypothetical protein. (821 aa)    
Predicted Functional Partners:
CBG75927.1
Putative two-component sensor kinase.
 
  
 0.936
CBG71160.1
Anti-anti-sigma factor BldG; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.917
CBG72844.1
Putative regulator; PMID:15793135; db matches only to second domain: none with same 2*STAS domain architecture; may bind NTPs PMID:10662676; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.893
CBG72507.1
Putative anti sigma factor antagonist; PMID:6088674; PMID:15793135; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.890
CBG69812.1
Putative membrane associated phophodiesterase.
  
 
 0.876
CBG74876.1
Conserved hypothetical protein; PAS domain may indicate role in signal detection.
 
 
0.866
SCAB_6251
Putative anti-anti-sigma-factor; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.855
CBG68882.1
Conserved hypothetical protein.
 
     0.801
CBG69622.1
Putative sensory histidine kinase.
  
  
 0.797
CBG72192.1
Putative anti-sigma-factor-binding protein; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.787
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.