Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CBG68949.1Putative sugar kinase. (381 aa)    
Predicted Functional Partners:
pgi2
Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
 0.930
CBG73393.1
Putative aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 
  
 0.919
pgm
Phosphoglucomutase.
    
 0.917
CBG74596.1
Putative PTS system sugar phosphotransferase component IIA.
  
 
 0.910
ino1
Putative 1L-myo-inositol-1-phosphate synthase.
     
 0.909
CBG71289.1
Conserved hypothetical protein.
    
 0.905
CBG68691.1
Putative glucosidase.
  
 
 0.904
CBG68804.1
Putative secreted protein.
     
 0.904
CBG72962.1
Putative sugar hydrolase.
  
 
 0.904
CBG68948.1
Probable secreted protein.
       0.874
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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