Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CBG69030.1Putative GntR-family regulatory protein. (254 aa)    
Predicted Functional Partners:
CBG69029.1
Putative amino acid synthase; Belongs to the TPP enzyme family.
 
   
 0.771
CBG72910.1
Conserved hypothetical protein.
 
     0.740
CBG72909.1
Putative carbohydrate kinase; PMID: 9226270; perhaps derived from Iol operon in common ancestor with B. subtilis.
 
   
 0.723
CBG72911.1
Conserved hypothetical protein; PMID: 9226270; perhaps derived from Iol operon in common ancestor with B. subtilis.
 
     0.647
CBG73157.1
Putative GntR-family regulator.
  
     0.611
CBG72908.1
Conserved hypothetical protein; PMID: 9226270; perhaps derived from Iol operon in common ancestor with B. subtilis.
 
  
 0.583
CBG72912.1
Putative thiamine pyrophosphate-dependent protein; PMID: 9226270; perhaps derived from Iol operon in common ancestor with B. subtilis; Belongs to the TPP enzyme family.
 
   
 0.576
iolG
Putative oxidoreductase; Involved in the oxidation of myo-inositol (MI) to 2-keto-myo- inositol (2KMI or 2-inosose).
 
    0.465
CBG71507.1
Putative GntR-family transcriptional regulator.
  
     0.446
CBG72079.1
Putative N-acetylglucosamine-6-phosphate deacetylase.
 
  
 0.428
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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