STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CBG69055.1Conserved hypothetical protein. (685 aa)    
Predicted Functional Partners:
CBG74514.1
Putative RNA-binding Sun protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
  
 
 0.809
CBG74087.1
Conserved hypothetical protein.
  
  0.780
CBG74173.1
Putative AfsR-homologue regulatory protein; PMID:10517581; PMID:15921897.
  
 
  0.776
CBG72457.1
Conserved hypothetical protein.
  
     0.764
CBG71048.1
Putative secreted protein.
  
     0.763
SCAB_7681
Conserved hypothetical protein.
  
     0.754
CBG70524.1
Putative regulatory protein; PMID: 10517581; PMID: 15921897.
  
 
  0.753
CBG71764.1
Putative bifunctional sensor kinase/response regulator.
  
 
   0.752
CBG71962.1
Conserved hypothetical protein.
  
     0.752
CBG72594.1
Conserved hypothetical protein.
 
 
 0.750
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.