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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBG69091.1Conserved hypothetical protein. (347 aa)    
Predicted Functional Partners:
CBG69092.1
Putative pyridoxal-phosphate dependent enzyme.
 
 
 0.995
CBG69090.1
Putative oxidoreductase; PMID: 12598647; PMID:11048953.
 
    0.908
CBG69088.1
Hexapeptide repeat protein with possible carrier domain.
 
   
 0.893
CBG69089.1
Putative NRPS-related protein.
 
   
 0.875
CBG68730.1
Putative FAD dependent oxidoreductase.
 
  
 0.495
CBG75640.1
Putative hydrogenase maturation protein.
      
 0.468
CBG70804.1
Conserved hypothetical protein.
 
     0.446
CBG72224.1
Putative secreted protein.
  
     0.430
CBG74998.1
Conserved hypothetical protein.
  
     0.413
CBG69093.1
Putative acyl-CoA dehydrogenase.
       0.411
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.