Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
CBG69091.1Conserved hypothetical protein. (347 aa)    
Predicted Functional Partners:
CBG69092.1
Putative pyridoxal-phosphate dependent enzyme.
 
  
 0.952
CBG69090.1
Putative oxidoreductase; PMID: 12598647; PMID:11048953.
 
    0.913
CBG69089.1
Putative NRPS-related protein.
 
   
 0.875
CBG69088.1
Hexapeptide repeat protein with possible carrier domain.
 
     0.871
CBG68730.1
Putative FAD dependent oxidoreductase.
 
  
 0.485
CBG75640.1
Putative hydrogenase maturation protein.
      
 0.454
CBG70804.1
Conserved hypothetical protein.
 
     0.448
CBG72224.1
Putative secreted protein.
  
     0.430
CBG74998.1
Conserved hypothetical protein.
  
     0.413
CBG69093.1
Putative acyl-CoA dehydrogenase.
       0.407
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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