STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBG69092.1Putative pyridoxal-phosphate dependent enzyme. (336 aa)    
Predicted Functional Partners:
CBG69091.1
Conserved hypothetical protein.
 
  
 0.952
CBG69090.1
Putative oxidoreductase; PMID: 12598647; PMID:11048953.
 
   
 0.839
CBG69088.1
Hexapeptide repeat protein with possible carrier domain.
 
 
 
 0.782
CBG69089.1
Putative NRPS-related protein.
 
   
 0.719
CBG68511.1
Putative copper oxidase.
  
  
 0.710
CBG75148.1
Putative PROBABLE CONSERVED INTEGRAL MEMBRANE TRANSPORT PROTEIN.
  
  
 0.709
metB
Cystathionine gamma-synthase.
 
 
 0.697
cysA
Putative cystathionine/methionine gamma-synthase/lyase.
 
 
 0.686
CBG74759.1
Putative cystathionine gamma-synthase.
 
 
 0.637
gltB
Putative Ferredoxin-dependent glutamate synthase 1; PMID:7727752.
     
 0.585
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.