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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCAB_1981Putative aldolase; PMID:8760910; cluster 0167 with SCAB12021 and SCAB67661; Belongs to the class-II DAHP synthase family. (484 aa)    
Predicted Functional Partners:
aroB
3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).
    
 0.941
CBG70695.1
Conserved hypothetical protein.
   
 
 0.928
CBG68370.1
Putative aldolase; PMID: 21475791; PMID:10103039; PMID:12819191; PMID:9426000; cluster 0167 with SCAB67661 and SCAB1981; Belongs to the class-II DAHP synthase family.
  
  
 
0.909
aroH
Putative 3-deoxy-7-phosphoheptulonate synthase; PMID:8760910; cluster 0167 with SCAB12021 and SCAB1981; Belongs to the class-II DAHP synthase family.
  
  
 
0.909
SCAB_1971
Putative aminodeoxychorismate synthase; PMID:9044253; PMID:14700630; PMID:14652074; PMID:11782498; PMID:8472954; PMID:15184904; PMID:8704974.
  
  
 0.720
SCAB_2001
Conserved hypothetical protein.
       0.666
SCAB_2011
Conserved hypothetical protein.
       0.654
CBG73873.1
Putative chorismate mutase.
 
 
 
 0.652
aroQ
Putative chorismate mutase.
   
 
 0.636
acpD
Putative acyl carrier protein phosphodiesterase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family.
       0.634
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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