STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBG69132.1Putative secreted chitin/cellulose-binding protein; PMID:9182697; cluster 0475 with SCAB21081. (352 aa)    
Predicted Functional Partners:
CBG69131.1
Putative exported protease; PMID:2187155.
     
 0.685
CBG75468.1
Chitinase.
 
  
 0.656
CBG74852.1
Putative secreted glycosylhydrolase; PMID:8457214.
 
  
 0.611
CBG70898.1
Putative secreted protein.
 
  
 0.606
CBG69059.1
Putative cellulose-binding protein.
  
   
 0.601
chiC
Putative chitinase C secreted protein; PMID: 11315108; PMID: 8515228; cluster 0608 with SCAB75761.
 
   
 0.600
CBG75158.1
Putative secreted glycosylhydrolase.
 
  
 0.597
CBG74552.1
Putative chitinase/cellulase; PMID: 11315108; PMID: 8515228; cluster 0608 with SCAB28731 but this CDS lacks secretion signal; Belongs to the glycosyl hydrolase 18 family.
 
   
 0.595
CBG68832.1
Putative secreted cellulase; Belongs to the glycosyl hydrolase family 6.
  
   
 0.593
CBG75944.1
Putative secreted cellulase; Belongs to the glycosyl hydrolase family 6.
  
   
 0.593
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.