Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CBG69163.1Putative integral membrane protein. (420 aa)    
Predicted Functional Partners:
CBG69162.1
Putative glycosyl hydrolase (family 42).
       0.594
CBG69161.1
Putative glycosyl hydrolase (family 35); Belongs to the glycosyl hydrolase 35 family.
       0.571
CBG72315.1
Putative integral membrane protein.
 
     0.541
CBG72316.1
Putative ABC transport system, transmembrane component.
 
     0.512
CBG72332.1
Putative sugar phosphotransferase system transporter.
   
  
 0.461
CBG69164.1
Putative acyltransferase.
  
    0.434
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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