STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBG69188.1Conserved hypothetical protein. (250 aa)    
Predicted Functional Partners:
CBG69186.1
Putative integral membrane protein.
 
     0.841
CBG69187.1
ABC-transporter ATP-binding subunit; TTA-Leu codon(s) 5 may indicate regulation by BldA.
 
     0.831
CBG69191.1
Putative myo-inositol catabolism protein.
       0.620
CBG73928.1
Conserved hypothetical protein.
  
 
   0.603
CBG69193.1
Putative integral membrane protein.
       0.595
CBG69184.1
Possible secreted polysaccharide deacetylase; Matches include putative lipoproteins in S. coelicolor and S. avermitilis.
       0.542
CBG69185.1
Conserved hypothetical protein.
       0.542
CBG75517.1
Conserved hypothetical protein.
       0.542
CBG72132.1
Conserved hypothetical protein.
  
     0.525
CBG74433.1
Hypothetical protein.
  
     0.503
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.