STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBG69190.1Putative secreted protein. (267 aa)    
Predicted Functional Partners:
CBG73675.1
Putative secreted protein; Contains G/N/Q-rich hydrophilic region with two direct repeats.
 
     0.782
SCAB_5111
Putative secreted protein.
 
     0.781
SCAB_7741
Putative membrane protein.
 
     0.781
CBG75315.1
Conserved hypothetical protein.
  
     0.716
CBG69084.1
Conserved hypothetical protein.
  
     0.715
CBG68733.1
Putative secreted protein.
  
     0.687
CBG69191.1
Putative myo-inositol catabolism protein.
 
     0.644
CBG73054.1
Putative integral membrane protein.
 
     0.625
CBG72617.1
Putative membrane protein.
 
     0.624
CBG68732.1
Conserved hypothetical protein.
  
     0.617
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
Server load: medium (62%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.