STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBG69223.1Putative secreted cellulose/chitin binding protein; PMID:9182697; PMID:7815940; PMID:9611804; cluster 0475 with SCAB20161; TTA-Leu codon(s) 8 may indicate regulation by BldA. (357 aa)    
Predicted Functional Partners:
CBG75944.1
Putative secreted cellulase; Belongs to the glycosyl hydrolase family 6.
 
   
 0.840
CBG68832.1
Putative secreted cellulase; Belongs to the glycosyl hydrolase family 6.
 
   
 0.838
CBG75943.1
Putative secreted cellulase.
  
   
 0.812
CBG68833.1
Putative secreted cellulase.
  
   
 0.810
CBG75468.1
Chitinase.
 
  
 0.753
CBG69059.1
Putative cellulose-binding protein.
  
     0.746
CBG68778.1
Glucanase; Cluster 0426 with SCAB57271; Belongs to the glycosyl hydrolase family 6.
  
   
 0.706
chiA
Chinitase A precursor; PMID: 7764265; PMID: 10705453; Belongs to the glycosyl hydrolase 18 family.
 
  
 0.636
CBG74552.1
Putative chitinase/cellulase; PMID: 11315108; PMID: 8515228; cluster 0608 with SCAB28731 but this CDS lacks secretion signal; Belongs to the glycosyl hydrolase 18 family.
 
   
 0.619
CBG70898.1
Putative secreted protein.
 
  
 0.561
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.