Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CBG69231.1Putative mobile element protein; PMID:8387993; cluster 0485 with SCAB29251. (491 aa)    
Predicted Functional Partners:
CBG70028.1
Putative excisionase.
 
   
 0.845
CBG74433.1
Hypothetical protein.
  
     0.664
CBG70029.1
Putative replication initiation protein; PMID: 9620953; PMID: 8029324; PMID: 9851040.
 
    0.592
CBG70033.1
Putative SpdA-like protein; PMID: 9620953.
 
     0.538
CBG68852.1
Conserved hypothetical protein.
  
     0.529
CBG74609.1
Conserved hypothetical protein.
  
     0.527
CBG68759.1
Putative transcriptional regulatory protein.
  
    0.509
CBG73278.1
Putative DNA-binding protein.
  
    0.506
SCAB_8551
Putative serine/threonine protein kinase (putative secreted protein).
  
     0.491
CBG69424.1
Conserved hypothetical protein.
  
     0.475
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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